dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001218_3|CGC1
Gene ID: MGYG000001218_00081
Location and strand information: 1082 - 2830 (+)
Family: GH35
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.2323
Protein molecular weight: 66113.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001218_3|CGC1
Gene ID: MGYG000001218_00082
Location and strand information: 2898 - 3482 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001218_3|CGC1
Gene ID: MGYG000001218_00083
Location and strand information: 3544 - 4515 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001218_3|CGC1
Gene ID: MGYG000001218_00084
Location and strand information: 4690 - 5298 (+)
Family: 3.A.1.31.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001218_3|CGC1
Gene ID: MGYG000001218_00085
Location and strand information: 5295 - 5996 (+)
Family: 3.A.1.31.1
Protein type: TC
Protein description: Energy-coupling factor transporter transmembrane protein EcfT

Gene clsuter ID: MGYG000001218_3|CGC1
Gene ID: MGYG000001218_00086
Location and strand information: 5997 - 7454 (+)
Family: 3.A.1.31.2
Protein type: TC
Protein description: Putative HMP/thiamine import ATP-binding protein YkoD

Gene clsuter ID: MGYG000001218_3|CGC1
Gene ID: MGYG000001218_00087
Location and strand information: 7460 - 9223 (+)
Family: 3.A.1.21.1
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000001218_3|CGC1
Gene ID: MGYG000001218_00088
Location and strand information: 9220 - 10968 (+)
Family: 3.A.1.21.1
Protein type: TC
Protein description: Lipid A export ATP-binding/permease protein MsbA

Gene clsuter ID: MGYG000001218_3|CGC1
Gene ID: MGYG000001218_00089
Location and strand information: 11469 - 13355 (+)
Family: 3.A.3.6.13
Protein type: TC
Protein description: Cadmium-transporting ATPase

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is galactomannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001218_00081	Beta-galactosidase	CAZyme	1082	2830	+	GH35
MGYG000001218_00082	hypothetical protein	null	2898	3482	-	ATC_hydrolase
MGYG000001218_00083	HTH-type transcriptional activator RhaR	TF	3544	4515	-	HTH_AraC+HTH_AraC
MGYG000001218_00084	hypothetical protein	TC	4690	5298	+	3.A.1.31.2
MGYG000001218_00085	Energy-coupling factor transporter transmembrane protein EcfT	TC	5295	5996	+	3.A.1.31.1
MGYG000001218_00086	Putative HMP/thiamine import ATP-binding protein YkoD	TC	5997	7454	+	3.A.1.31.2
MGYG000001218_00087	Vitamin B12 import ATP-binding protein BtuD	TC	7460	9223	+	3.A.1.21.1
MGYG000001218_00088	Lipid A export ATP-binding/permease protein MsbA	TC	9220	10968	+	3.A.1.21.1
MGYG000001218_00089	Cadmium-transporting ATPase	TC	11469	13355	+	3.A.3.6.13
Protein ID	Protein Name	Type	Start	End	Strand	Signature